#include <qcpspectrum.h>

Inheritance diagram for pappso::QCPSpectrum:

Protected Member Functions
	QCPSpectrum (MassSpectrumWidget *parent, bool visible)

	~QCPSpectrum ()

void	clearData ()

void	rescale ()

void	setSpectrumP (const MassSpectrum *spectrum)

void	addMassDelta (const PeakIonIsotopeMatch &peak_ion_match)

void	addMs1IsotopePattern (const std::vector< pappso::PeptideNaturalIsotopeAverageSp > &isotope_mass_list, pappso_double intensity)

void	addPeakIonIsotopeMatch (const PeakIonIsotopeMatch &peak_ion_match)

void	highlightPrecursorPeaks (double precursor_mz, PrecisionPtr ms2_precision)

virtual void	mouseMoveEvent (QMouseEvent *event) override

virtual void	mousePressEvent (QMouseEvent *event) override

virtual void	mouseReleaseEvent (QMouseEvent *event) override

virtual void	keyPressEvent (QKeyEvent *event) override

virtual void	keyReleaseEvent (QKeyEvent *event) override

Private Member Functions
void	getNearestPeakBetween (pappso_double mz, pappso_double mouse_mz_range) const

void	getMostIntensePeakBetween (pappso_double mz, pappso_double mouse_mz_range) const

Q_SLOT void	setMzRangeChanged (QCPRange range)

Private Attributes
MassSpectrumWidget *	_parent

const MassSpectrum *	_p_spectrum = nullptr

QCPRange	_mz_range

QCPRange	_intensity_range

QCPRange	_mass_delta_range

QCPBars *	_p_peak_bars

QCPBars *	_p_peak_bars_isotope

QCPBars *	mp_peak_bars_precursor

std::map< PeptideIon, QCPBars * >	_map_ion_type_bars

QCPAxisRect *	_p_delta_axis_rect

QCPGraph *	_p_delta_graph

double	_bar_width = 0.5

bool	_click = false

bool	_control_key = false

pappso::pappso_double	_old_x

pappso::pappso_double	_old_y

Friends
class	MassSpectrumWidget

Detailed Description

Definition at line 45 of file qcpspectrum.h.

Constructor & Destructor Documentation

◆ QCPSpectrum()

QCPSpectrum::QCPSpectrum	(	MassSpectrumWidget *	parent,
		bool	visible
	)

protected

< Cter amino ions

< Cter amino ions + NH3 loss

< Cter amino ions + H2O loss

< Cter carbocations

Definition at line 37 of file qcpspectrum.cpp.

   : QCustomPlot(parent)
 {
   qDebug() << "QCPSpectrum::QCPSpectrum begin";
  
   setFocusPolicy(Qt::ClickFocus);
   _parent                 = parent;
   _mz_range.lower         = 0;
   _mz_range.upper         = 0;
   _intensity_range.lower  = 0;
   _intensity_range.upper  = 0;
   _mass_delta_range.upper = -100;
   _mass_delta_range.lower = 100;
  
  
   // make axis rects' left side line up:
   QCPMarginGroup *group = new QCPMarginGroup(this);
   this->axisRect()->setMarginGroup(QCP::msLeft | QCP::msRight, group);
  
  
   _p_peak_bars = new QCPBars(xAxis, yAxis);
   _p_peak_bars->setWidthType(QCPBars::WidthType::wtAbsolute);
   _p_peak_bars->setWidth(_bar_width);
   _p_peak_bars->setPen(QPen(Qt::black, 1));
   _p_peak_bars->setVisible(true);
  
   _p_peak_bars_isotope = new QCPBars(xAxis, yAxis);
   _p_peak_bars_isotope->setWidthType(QCPBars::WidthType::wtAbsolute);
   _p_peak_bars_isotope->setWidth(_bar_width * 10);
   QColor red(Qt::red);
   red.setAlpha(100);
   _p_peak_bars_isotope->setPen(QPen(red, 1));
   _p_peak_bars_isotope->setBrush(QBrush(red));
  
   mp_peak_bars_precursor = new QCPBars(xAxis, yAxis);
   mp_peak_bars_precursor->setWidthType(QCPBars::WidthType::wtAbsolute);
   mp_peak_bars_precursor->setWidth(_bar_width * 1.5);
   mp_peak_bars_precursor->setPen(QPen(Qt::cyan, 1));
   mp_peak_bars_precursor->setVisible(true);
  
   connect(this->xAxis,
           SIGNAL(rangeChanged(QCPRange)),
           this,
           SLOT(setMzRangeChanged(QCPRange)));
  
  
   std::vector<PeptideIon> all_ion_list = {
     PeptideIon::b,
     PeptideIon::bstar,
     PeptideIon::bo,
     PeptideIon::a,
     PeptideIon::astar,
     PeptideIon::ao,
     PeptideIon::bp,
     PeptideIon::c,
     PeptideIon::y,     ///< Cter amino ions
     PeptideIon::ystar, ///< Cter amino ions + NH3 loss
     PeptideIon::yo,    ///< Cter amino ions + H2O loss
     PeptideIon::z,     ///< Cter carbocations
     PeptideIon::yp,
     PeptideIon::x};
   qDebug() << "SpectrumWidget::setVisibleMassDelta 5";
  
   for(PeptideIon ion_type : all_ion_list)
     {
       QCPBars *p_peak_bars = new QCPBars(xAxis, yAxis);
       p_peak_bars->setWidthType(QCPBars::WidthType::wtAbsolute);
       p_peak_bars->setWidth(_bar_width);
       p_peak_bars->setPen(
         QPen(PeptideFragmentIon::getPeptideIonColor(ion_type), 1));
  
       p_peak_bars->setVisible(true);
       _map_ion_type_bars.insert(
         std::pair<PeptideIon, QCPBars *>(ion_type, p_peak_bars));
     }
   qDebug() << "SpectrumWidget::setVisibleMassDelta visible ?";
   setInteractions(QCP::iRangeDrag | QCP::iRangeZoom);
   if(visible)
     {
  
       _p_delta_axis_rect = new QCPAxisRect(this);
       this->plotLayout()->addElement(1, 0, _p_delta_axis_rect);
       _p_delta_axis_rect->axis(QCPAxis::atBottom)->setLayer("axes");
       _p_delta_axis_rect->axis(QCPAxis::atBottom)->grid()->setLayer("grid");
       _p_delta_axis_rect->axis(QCPAxis::atLeft)->setLabel("mass delta");
       // bring bottom and main axis rect closer together:
       this->plotLayout()->setRowSpacing(0);
       _p_delta_axis_rect->setAutoMargins(QCP::msLeft | QCP::msRight |
                                          QCP::msBottom);
       _p_delta_axis_rect->setMargins(QMargins(0, 0, 0, 0));
       this->setAutoAddPlottableToLegend(false);
       _p_delta_graph = new QCPGraph(_p_delta_axis_rect->axis(QCPAxis::atBottom),
                                     _p_delta_axis_rect->axis(QCPAxis::atLeft));
       _p_delta_graph->setLineStyle(QCPGraph::LineStyle::lsNone);
       _p_delta_graph->setScatterStyle(
         QCPScatterStyle(QCPScatterStyle::ssDisc, 4.0));
  
       _p_delta_axis_rect->setMarginGroup(QCP::msLeft | QCP::msRight, group);
       _p_delta_axis_rect->setMaximumSize(QSize(QWIDGETSIZE_MAX, 100));
  
  
       //_p_delta_axis_rect->setInteractions(QCP::iRangeDrag | QCP::iRangeZoom );
       _p_delta_axis_rect->setRangeDrag(Qt::Horizontal | Qt::Vertical);
       _p_delta_axis_rect->setRangeZoom(Qt::Vertical);
  
  
       connect(_p_delta_axis_rect->axis(QCPAxis::atBottom),
               SIGNAL(rangeChanged(QCPRange)),
               this,
               SLOT(setMzRangeChanged(QCPRange)));
     }
   else
     {
       _p_delta_axis_rect = nullptr;
     }
   qDebug() << "QCPSpectrum::QCPSpectrum end";
 }

References _bar_width, _intensity_range, _map_ion_type_bars, _mass_delta_range, _mz_range, _p_delta_axis_rect, _p_delta_graph, _p_peak_bars, _p_peak_bars_isotope, _parent, pappso::a, pappso::ao, pappso::astar, pappso::b, pappso::bo, pappso::bp, pappso::bstar, pappso::c, pappso::PeptideFragmentIon::getPeptideIonColor(), mp_peak_bars_precursor, setMzRangeChanged(), pappso::x, pappso::y, pappso::yo, pappso::yp, pappso::ystar, and pappso::z.

◆ ~QCPSpectrum()

QCPSpectrum::~QCPSpectrum ( )

protected

Definition at line 154 of file qcpspectrum.cpp.

155 {

156 }

Member Function Documentation

◆ addMassDelta()

void QCPSpectrum::addMassDelta ( const PeakIonIsotopeMatch & peak_ion_match )

protected

Definition at line 425 of file qcpspectrum.cpp.

 {
   if(_p_delta_axis_rect != nullptr)
     {
       // observed - theoretical
       double diff =
         peak_ion_match.getPeak().x -
         peak_ion_match.getPeptideNaturalIsotopeAverageSp().get()->getMz();
       _p_delta_graph->addData(peak_ion_match.getPeak().x, diff);
  
       if(diff > _mass_delta_range.upper)
         _mass_delta_range.upper = diff;
       if(diff < _mass_delta_range.lower)
         _mass_delta_range.lower = diff;
  
       _p_delta_axis_rect->axis(QCPAxis::AxisType::atLeft)
         ->setRange(_mass_delta_range);
     }
 }

References _mass_delta_range, _p_delta_axis_rect, _p_delta_graph, pappso::PeakIonMatch::getPeak(), pappso::PeakIonIsotopeMatch::getPeptideNaturalIsotopeAverageSp(), and pappso::DataPoint::x.

Referenced by pappso::MassSpectrumWidget::plot().

◆ addMs1IsotopePattern()

void QCPSpectrum::addMs1IsotopePattern	(	const std::vector< pappso::PeptideNaturalIsotopeAverageSp > &	isotope_mass_list,
		pappso_double	intensity
	)

protected

Definition at line 453 of file qcpspectrum.cpp.

 {
   pappso_double total_intensity =
     ((pappso_double)1.0 / isotope_mass_list.at(0).get()->getIntensityRatio()) *
     intensity;
   for(PeptideNaturalIsotopeAverageSp peptide : isotope_mass_list)
     {
       _p_peak_bars_isotope->addData(peptide.get()->getMz(),
                                     peptide.get()->getIntensityRatio() *
                                       total_intensity);
     }
 }

References _p_peak_bars_isotope.

Referenced by pappso::MassSpectrumWidget::plot().

◆ addPeakIonIsotopeMatch()

void QCPSpectrum::addPeakIonIsotopeMatch ( const PeakIonIsotopeMatch & peak_ion_match )

protected

Definition at line 446 of file qcpspectrum.cpp.

 {
   _map_ion_type_bars[peak_ion_match.getPeptideIonType()]->addData(
     peak_ion_match.getPeak().x, peak_ion_match.getPeak().y);
 }

References _map_ion_type_bars, pappso::PeakIonMatch::getPeak(), pappso::PeakIonMatch::getPeptideIonType(), pappso::DataPoint::x, and pappso::DataPoint::y.

Referenced by pappso::MassSpectrumWidget::plot().

◆ clearData()

void QCPSpectrum::clearData ( )

protected

Definition at line 244 of file qcpspectrum.cpp.

 {
   qDebug();
   _p_peak_bars->setData(QVector<double>(), QVector<double>());
   _p_peak_bars->data().clear();
   qDebug();
   _p_peak_bars_isotope->setData(QVector<double>(), QVector<double>());
   _p_peak_bars_isotope->data().clear();
   qDebug();
   for(std::pair<PeptideIon, QCPBars *> pair_ion_bar : _map_ion_type_bars)
     {
       pair_ion_bar.second->setData(QVector<double>(), QVector<double>());
       pair_ion_bar.second->data().clear();
     }
   // this->clearPlottables();
   // this->clearItems();
   if(_p_delta_axis_rect != nullptr)
     {
       _p_delta_graph->setData(QVector<double>(), QVector<double>());
       _p_delta_graph->data().clear();
     }
  
   _mz_range.lower = 0;
   _mz_range.upper = 0;
  
   _mass_delta_range.upper = -100;
   _mass_delta_range.lower = 100;
   qDebug();
 }

References _map_ion_type_bars, _mass_delta_range, _mz_range, _p_delta_axis_rect, _p_delta_graph, _p_peak_bars, and _p_peak_bars_isotope.

Referenced by pappso::MassSpectrumWidget::clearData().

◆ getMostIntensePeakBetween()

void QCPSpectrum::getMostIntensePeakBetween	(	pappso_double	mz,
		pappso_double	mouse_mz_range
	)		const

private

Definition at line 393 of file qcpspectrum.cpp.

 {
   /*qDebug() << "QCPSpectrum::getNearestPeakBetween begin " << mz << " "
            << mouse_mz_range;*/
   const DataPoint *p_peak_match;
   p_peak_match      = nullptr;
   pappso_double min = mz - mouse_mz_range;
   pappso_double max = mz + mouse_mz_range;
  
   for(const DataPoint &peak : *_p_spectrum)
     {
       if((peak.x > min) && (peak.x < max))
         {
           if(p_peak_match == nullptr)
             {
               p_peak_match = &peak;
             }
           else
             {
               if(p_peak_match->y < peak.y)
                 {
                   p_peak_match = &peak;
                 }
             }
         }
     }
   _parent->peakChangeEvent(p_peak_match);
   // qDebug() << "QCPSpectrum::getNearestPeakBetween end";
 }

References _p_spectrum, _parent, pappso::max, pappso::mz, pappso::MassSpectrumWidget::peakChangeEvent(), and pappso::DataPoint::y.

Referenced by mouseMoveEvent().

◆ getNearestPeakBetween()

void QCPSpectrum::getNearestPeakBetween	(	pappso_double	mz,
		pappso_double	mouse_mz_range
	)		const

private

Definition at line 360 of file qcpspectrum.cpp.

 {
   /*qDebug() << "QCPSpectrum::getNearestPeakBetween begin " << mz << " "
            << mouse_mz_range;*/
   const DataPoint *p_peak_match;
   p_peak_match      = nullptr;
   pappso_double min = mz - mouse_mz_range;
   pappso_double max = mz + mouse_mz_range;
  
   for(const DataPoint &peak : *_p_spectrum)
     {
       if((peak.x > min) && (peak.x < max))
         {
           if(p_peak_match == nullptr)
             {
               p_peak_match = &peak;
             }
           else
             {
               if(fabs(mz - peak.x) < fabs(mz - p_peak_match->x))
                 {
                   p_peak_match = &peak;
                 }
             }
         }
     }
   _parent->peakChangeEvent(p_peak_match);
   // qDebug() << "QCPSpectrum::getNearestPeakBetween end";
 }

References _p_spectrum, _parent, pappso::max, pappso::mz, pappso::MassSpectrumWidget::peakChangeEvent(), and pappso::DataPoint::x.

◆ highlightPrecursorPeaks()

void pappso::QCPSpectrum::highlightPrecursorPeaks	(	double	precursor_mz,
		PrecisionPtr	ms2_precision
	)

protected

Definition at line 469 of file qcpspectrum.cpp.

 {
   MzRange range(precursor_mz, ms2_precision);
  
   for(const DataPoint &peak : *_p_spectrum)
     {
       if((peak.x > range.lower()) && (peak.x < range.upper()))
         {
           mp_peak_bars_precursor->addData(peak.x, peak.y);
           QCPItemText *text_label = new QCPItemText(this);
           text_label->setVisible(true);
           text_label->setPositionAlignment(Qt::AlignBottom | Qt::AlignHCenter);
           text_label->position->setType(QCPItemPosition::ptPlotCoords);
           text_label->position->setCoords(
             peak.x,
             peak.y); // place position at center/top of axis rect
           text_label->setFont(QFont(font().family(), 8));
           text_label->setText("precursor");
           text_label->setColor(Qt::cyan);
         }
     }
 }

References pappso::MzRange::lower(), and pappso::MzRange::upper().

◆ keyPressEvent()

void QCPSpectrum::keyPressEvent ( QKeyEvent * event )

overrideprotectedvirtual

Definition at line 275 of file qcpspectrum.cpp.

 {
   if(event->key() == Qt::Key_Control)
     {
       _control_key = true;
     }
   qDebug() << "QCPSpectrum::keyPressEvent end";
 }

References _control_key.

◆ keyReleaseEvent()

void QCPSpectrum::keyReleaseEvent ( QKeyEvent * event )

overrideprotectedvirtual

Definition at line 285 of file qcpspectrum.cpp.

 {
   if(event->key() == Qt::Key_Control)
     {
       _control_key = false;
     }
   qDebug() << "QCPSpectrum::keyReleaseEvent end";
 }

References _control_key.

◆ mouseMoveEvent()

void QCPSpectrum::mouseMoveEvent ( QMouseEvent * event )

overrideprotectedvirtual

Definition at line 317 of file qcpspectrum.cpp.

 {
   pappso::pappso_double x = xAxis->pixelToCoord(event->x());
   if(_click)
     {
       /* qDebug() << "QCPSpectrum::mouseMoveEvent begin "
                 << xAxis->pixelToCoord(event->x()) << " "
                 << yAxis->pixelToCoord(event->y());*/
       pappso::pappso_double y = yAxis->pixelToCoord(event->y());
       if(y < 0)
         {
           y = 0;
         }
       if(_control_key)
         {
           if(y > 0)
             {
               this->yAxis->scaleRange(_old_y / y, 0);
             }
         }
       else
         {
           this->xAxis->moveRange(xAxis->pixelToCoord(_old_x) -
                                  xAxis->pixelToCoord(event->x()));
         }
       _old_x = event->x();
       _old_y = y;
       replot();
       // qDebug() << "QCPSpectrum::mouseMoveEvent end";
     }
   else
     {
       if(_p_spectrum != nullptr)
         {
           pappso::pappso_double mouse_mz_range =
             xAxis->pixelToCoord(10) - xAxis->pixelToCoord(8);
           getMostIntensePeakBetween(x, mouse_mz_range);
           _parent->mzChangeEvent(x);
         }
     }
 }

References _click, _control_key, _old_x, _old_y, _p_spectrum, _parent, getMostIntensePeakBetween(), pappso::MassSpectrumWidget::mzChangeEvent(), pappso::x, and pappso::y.

◆ mousePressEvent()

void QCPSpectrum::mousePressEvent ( QMouseEvent * event )

overrideprotectedvirtual

Definition at line 295 of file qcpspectrum.cpp.

 {
   /*qDebug() << "QCPSpectrum::mousePressEvent begin "
            << xAxis->pixelToCoord(event->x()) << " "
            << yAxis->pixelToCoord(event->y());*/
   _click = true;
   _old_x = event->x();
   _old_y = yAxis->pixelToCoord(event->y());
   if(_old_y < 0)
     _old_y = 0;
   /* qDebug() << "QCPSpectrum::mousePressEvent end";*/
 }

References _click, _old_x, and _old_y.

◆ mouseReleaseEvent()

void QCPSpectrum::mouseReleaseEvent ( QMouseEvent * event )

overrideprotectedvirtual

Definition at line 308 of file qcpspectrum.cpp.

 {
   /*qDebug() << "QCPSpectrum::mouseReleaseEvent begin "
            << xAxis->pixelToCoord(event->x()) << " "
            << yAxis->pixelToCoord(event->y());*/
   _click = false;
   // qDebug() << "QCPSpectrum::mouseReleaseEvent end";
 }

References _click.

◆ rescale()

void QCPSpectrum::rescale ( )

protected

Definition at line 190 of file qcpspectrum.cpp.

 {
   _p_peak_bars->setVisible(true);
  
   //_p_peak_bars->rescaleAxes(false);
   // this->rescaleAxes(false);
  
  
   if(_mz_range.lower < 0)
     {
       _mz_range.lower = 0;
     }
   if(_mz_range.upper < 0)
     {
       _mz_range.upper = 1000;
     }
   else
     {
       xAxis->setRange(_mz_range);
       yAxis->setRange(_intensity_range);
       if(_p_delta_axis_rect != nullptr)
         {
           _p_delta_axis_rect->axis(QCPAxis::AxisType::atLeft)
             ->setRange(_mass_delta_range);
         }
     }
 }

References _intensity_range, _mass_delta_range, _mz_range, _p_delta_axis_rect, and _p_peak_bars.

Referenced by pappso::MassSpectrumWidget::rescale().

◆ setMzRangeChanged()

void QCPSpectrum::setMzRangeChanged ( QCPRange range )

private

Definition at line 219 of file qcpspectrum.cpp.

 {
   qDebug() << "QCPSpectrum::setMzRangeChanged _mz_range.lower"
            << _mz_range.lower;
   if(_mz_range.lower > 0)
     {
       if(range.lower < _mz_range.lower)
         {
           range.lower = _mz_range.lower;
         }
       if(range.upper > _mz_range.upper)
         {
           range.upper = _mz_range.upper;
         }
     }
  
   xAxis->setRange(range);
  
   if(_p_delta_axis_rect != nullptr)
     {
       _p_delta_axis_rect->axis(QCPAxis::atBottom)->setRange(range);
     }
 }

References _mz_range, and _p_delta_axis_rect.

Referenced by QCPSpectrum().

◆ setSpectrumP()

void QCPSpectrum::setSpectrumP ( const MassSpectrum * spectrum )

protected

Definition at line 159 of file qcpspectrum.cpp.

 {
   _mass_delta_range.upper = -100;
   _mass_delta_range.lower = 100;
   // generate basic peaks:
   _p_spectrum = spectrum;
   if((spectrum != nullptr) && (spectrum->size() != 0))
     {
       // throw PappsoException(QObject::tr("Error in
       // SpectrumWidget::setSpectrumSp :\n_spectrum_sp.get() == nullptr"));
       //}
       _p_peak_bars->setVisible(true);
       for(const DataPoint &peak : *spectrum)
         {
           _p_peak_bars->addData(peak.x, peak.y);
         }
       _mz_range.lower        = spectrum->front().x - 1;
       _mz_range.upper        = spectrum->back().x + 1;
       _intensity_range.lower = 0;
       _intensity_range.upper = spectrum->maxY();
     }
   else
     {
       _mz_range.lower        = 0;
       _mz_range.upper        = 0;
       _intensity_range.lower = 0;
       _intensity_range.upper = 0;
     }
 }

References _intensity_range, _mass_delta_range, _mz_range, _p_peak_bars, and _p_spectrum.

Referenced by pappso::MassSpectrumWidget::clearData().

Friends And Related Function Documentation

◆ MassSpectrumWidget

friend class MassSpectrumWidget

friend

Definition at line 49 of file qcpspectrum.h.

Member Data Documentation

◆ _bar_width

double pappso::QCPSpectrum::_bar_width = 0.5

private

Definition at line 91 of file qcpspectrum.h.

Referenced by QCPSpectrum().

◆ _click

bool pappso::QCPSpectrum::_click = false

private

Definition at line 92 of file qcpspectrum.h.

Referenced by mouseMoveEvent(), mousePressEvent(), and mouseReleaseEvent().

◆ _control_key

bool pappso::QCPSpectrum::_control_key = false

private

Definition at line 93 of file qcpspectrum.h.

Referenced by keyPressEvent(), keyReleaseEvent(), and mouseMoveEvent().

◆ _intensity_range

QCPRange pappso::QCPSpectrum::_intensity_range

private

Definition at line 83 of file qcpspectrum.h.

Referenced by QCPSpectrum(), rescale(), and setSpectrumP().

◆ _map_ion_type_bars

std::map<PeptideIon, QCPBars *> pappso::QCPSpectrum::_map_ion_type_bars

private

Definition at line 88 of file qcpspectrum.h.

Referenced by QCPSpectrum(), addPeakIonIsotopeMatch(), and clearData().

◆ _mass_delta_range

QCPRange pappso::QCPSpectrum::_mass_delta_range

private

Definition at line 84 of file qcpspectrum.h.

Referenced by QCPSpectrum(), addMassDelta(), clearData(), rescale(), and setSpectrumP().

◆ _mz_range

QCPRange pappso::QCPSpectrum::_mz_range

private

Definition at line 82 of file qcpspectrum.h.

Referenced by QCPSpectrum(), clearData(), rescale(), setMzRangeChanged(), and setSpectrumP().

◆ _old_x

pappso::pappso_double pappso::QCPSpectrum::_old_x

private

Definition at line 94 of file qcpspectrum.h.

Referenced by mouseMoveEvent(), and mousePressEvent().

◆ _old_y

pappso::pappso_double pappso::QCPSpectrum::_old_y

private

Definition at line 95 of file qcpspectrum.h.

Referenced by mouseMoveEvent(), and mousePressEvent().

◆ _p_delta_axis_rect

QCPAxisRect* pappso::QCPSpectrum::_p_delta_axis_rect

private

Definition at line 89 of file qcpspectrum.h.

Referenced by QCPSpectrum(), addMassDelta(), clearData(), rescale(), and setMzRangeChanged().

◆ _p_delta_graph

QCPGraph* pappso::QCPSpectrum::_p_delta_graph

private

Definition at line 90 of file qcpspectrum.h.

Referenced by QCPSpectrum(), addMassDelta(), and clearData().

◆ _p_peak_bars

QCPBars* pappso::QCPSpectrum::_p_peak_bars

private

Definition at line 85 of file qcpspectrum.h.

Referenced by QCPSpectrum(), clearData(), rescale(), and setSpectrumP().

◆ _p_peak_bars_isotope

QCPBars* pappso::QCPSpectrum::_p_peak_bars_isotope

private

Definition at line 86 of file qcpspectrum.h.

Referenced by QCPSpectrum(), addMs1IsotopePattern(), and clearData().

◆ _p_spectrum

const MassSpectrum* pappso::QCPSpectrum::_p_spectrum = nullptr

private

Definition at line 81 of file qcpspectrum.h.

Referenced by getMostIntensePeakBetween(), getNearestPeakBetween(), mouseMoveEvent(), and setSpectrumP().

◆ _parent

MassSpectrumWidget* pappso::QCPSpectrum::_parent

private

Definition at line 80 of file qcpspectrum.h.

Referenced by QCPSpectrum(), getMostIntensePeakBetween(), getNearestPeakBetween(), and mouseMoveEvent().

◆ mp_peak_bars_precursor

QCPBars* pappso::QCPSpectrum::mp_peak_bars_precursor

private

Definition at line 87 of file qcpspectrum.h.

Referenced by QCPSpectrum().

The documentation for this class was generated from the following files:

pappsomspp/widget/massspectrumwidget/qcpspectrum.h
pappsomspp/widget/massspectrumwidget/qcpspectrum.cpp

Protected Member Functions

Private Member Functions

Private Attributes

Friends

Detailed Description

Constructor & Destructor Documentation

◆ QCPSpectrum()

◆ ~QCPSpectrum()

Member Function Documentation

◆ addMassDelta()

◆ addMs1IsotopePattern()

◆ addPeakIonIsotopeMatch()

◆ clearData()

◆ getMostIntensePeakBetween()

◆ getNearestPeakBetween()

◆ highlightPrecursorPeaks()

◆ keyPressEvent()

◆ keyReleaseEvent()

◆ mouseMoveEvent()

◆ mousePressEvent()

◆ mouseReleaseEvent()

◆ rescale()

◆ setMzRangeChanged()

◆ setSpectrumP()

Friends And Related Function Documentation

◆ MassSpectrumWidget

Member Data Documentation

◆ _bar_width

◆ _click

◆ _control_key

◆ _intensity_range

◆ _map_ion_type_bars

◆ _mass_delta_range

◆ _mz_range

◆ _old_x

◆ _old_y

◆ _p_delta_axis_rect

◆ _p_delta_graph

◆ _p_peak_bars

◆ _p_peak_bars_isotope

◆ _p_spectrum

◆ _parent

◆ mp_peak_bars_precursor